太阳成8722
Hytran Biotechnology Co., Ltd.

甲基化修饰(Methylation)

        RNA甲基化是指将甲基基团共价添加到RNA核苷酸上的修饰方式,对RNA稳定性、定位、运输、剪切和翻译等发挥重要的作用。根据修饰位置,RNA甲基化类型分为m6A,m1A,m3C,m5C,m7G和2’-O-me等。RNA甲基化是一个动态调控过程,三类关键蛋白参与其中:甲基转移酶(Writer),负责将甲基基团共价添加到RNA核苷酸上;去甲基化酶‌(Eraser),负责把甲基基团从RNA核苷酸上移除;甲基识别蛋白(Reader),负责识别甲基基团并发挥作用1。不同RNA甲基化类型的调控蛋白可见表1。

RNA methylation refers to the modification process where methyl groups are covalently added to RNA nucleotides, playing a crucial role in RNA stability, localization, transportation, splicing, and translation. Based on the modification location, RNA methylation types are classified into m6A, m1A, m3C, m5C, m7G, and 2'-O-me. RNA methylation is a dynamically regulated process involving three key proteins: Writer, responsible for covalently adding methyl groups to RNA nucleotides; Eraser, responsible for removing methyl groups from RNA nucleotides; and Reader, responsible for recognizing and exerting the function of methyl groups1. The regulatory proteins for different RNA methylation types are shown in Table 1.

图1 RNA甲基化机制示意图1

Fig.1 Schematic diagram of molecular mechanisms for RNA methylation1


                                                                 表1 RNA甲基化调控蛋白

                                                                 Table 1 The regulator proteins of RNA methylations

甲基化类型
(Methylations)
甲基转移酶(Writers)
去甲基化酶(Erasers)
甲基识别蛋白(Readers)
m6A
METTL3, METTL14, METTL16, RBM15, WTAP, KIAA1429, ZC3H13, VIRMA
FTO, ALKBH5
IGF2BP3, YTHDC1, YTHDC2, YTHDF1, YTHDF2, YTHDF3, ELAVL1
m1A
TRM6, TRMT61A, TRMT61B, TRMT10C, RRP8
ALKBH1, ALKBH3, ALKBH7, FTO
YTHDC1, YTHDF1, YTHDF2, YTHDF3
m3C
METTL2A, METTL2B, METTL6, METTL8
ALKBH1‌

m5C
DNMT2, NOP2, NSUN1, NSUN2, NSUN3, NSUN5, NSUN6, NSUN7
TET1, TET2, ALKBH1
LIN28B, ALYREF, YBX1, RAD52, FMRP, YTHDF2
m7G
METTL1, WDR4, RNMT, WBSCR22, TRMT112

eIF4E1, eIF4E2, eIF4E3, NUDT16
2’-O-me
CMTR1, CMTR2, hTrmt13, FTSJ1, TARBP1, C/D-box snoRNPs, MRM1, MRM2, MRM3




                                                              检测方法(Methods)

指标
(Indicators)
方法
(Methods)
抗体(Antibodies)
样品
(Samples)
m6A, m1A, m5C, m7G
甲基化RNA免疫共沉淀(Methylated RNA immunoprecipitation,MeRIP)
m6A/m1A/m5C/
m7G抗体(m6A/m1A/m5C/
m7G antibody)
组织/细胞 (Tissues/Cells)
m3C
AlkAniline-Seq/
HAC-Seq‌

组织/细胞 (Tissues/Cells)
2’-O-me
Nm-seq

组织/细胞 (Tissues/Cells)
目的RNA与RNA甲基化调控蛋白结合
(Interaction of target RNAs and regulator proteins of RNA methylations)
反义RNA纯化技术(RNA Antisense Purification,RAP)/ RNA免疫共沉淀(RNA Immunoprecipitation,RIP)/ RNA pulldown

组织/细胞 (Tissues/Cells)



应用(Application)

1. 确定靶RNA甲基化(Identification of target RNA methylation);

2. RNA修饰测序(Sequencing of modified RNAs)。


客户提供的材料与信息(Materials and information provided by customers):

1、目的RNA信息(Target RNA information);

2、细胞样本(Cells):不低于2×10^7个细胞(No less than 2×10^7 cells);

3、组织样本(Tissues):不低于1g(No less than 1g)。


参考文献(Reference)

1    Li, Y. et al. The role of RNA methylation in tumor immunity and its potential in immunotherapy. Mol Cancer 23, 130 (2024). https://doi.org/10.1186/s12943-024-02041-8



文章分类: 表观-RNARNA修饰研究
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